RABGGTA

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RABGGTA mutation is significantly associated with the total protein of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible RABGGTA-associated genes across cancer lineages are FoxM1, Shc_pY317, and JNK_pT183_Y185. Each is linked with RABGGTA in more than 1 cancer types. Because this analysis shows association rather than direction, both RABGGTA-to-partner and partner-to-RABGGTA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FoxM1 grouped by RABGGTA-low versus RABGGTA-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RABGGTA→partner) and Y-score (partner→RABGGTA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECFoxM1 →+0.261+1.906.012.01632
UCECShc_pY317 →-0.185-2.000.002.03032
UCECJNK_pT183_Y185 →-0.168-2.401.013.00331
UCECJNK2 →+0.187+2.125.019.01031
UCECLKB1 →-0.096-3.169.025.01931
UCECMEK1 →+0.407+1.906.005.01631
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

FoxM1 by RABGGTA expression — UCEC

Box plot of FoxM1 in RABGGTA-low vs RABGGTA-high samples in UCEC.

Explore this box plot interactively →

Exploration