RABGAP1L-IT1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RABGAP1L-IT1 RNA differs between tumor and matched normal tissue in 7 of 18 cancer types tested, making tumor–normal expression one of RABGAP1L-IT1’s most consistent transcriptional readouts.

The strongest signal is observed in stomach adenocarcinoma (STAD), where RABGAP1L-IT1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types RABGAP1L-IT1 is over-expressed in tumor, although a few such as KIRP and THCA show the opposite, repressed pattern.

STAD, LIHC, and BRCA are the cancer types where RABGAP1L-IT1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RABGAP1L-IT1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
STADAllAll+0.663<.0016view →
LIHCMaleAll+0.044.0046view →
BRCAFemaleAll+0.160.0264view →
ESCAAllII,III,IV+1.529.0342view →
HNSCMaleIII,IV+0.081.0362view →
KIRPMaleII,III,IV−0.054.0182view →
THCAFemaleAll−0.039.0381view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 7 strongest of 7 lineages.

Exploration