RABGAP1

mass-spec protein & survival
Survivalmass-specKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RABGAP1 mass-spec protein is linked to patient survival in 6 of 34 cancer types, making it a survival-associated RABGAP1 data layer compared with 25 for mass-spec protein and 5 for mutation status.

The strongest signal is observed in clear cell renal cell carcinoma (CCRCC), where higher RABGAP1 mass-spec protein is associated with better disease-free survival. In most high-consensus cancer types, elevated RABGAP1 expression acts as an unfavorable survival marker, although some lineages such as CCRCC and HNSC show a favorable association.

CCRCC, HNSC, and UCEC are the cancer types where RABGAP1 mass-spec protein most reproducibly stratifies survival.

mass-spec protein survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 indicate survival in the high- and low-expression groups, respectively; the lower AUC marks the poorer-surviving group. p-values are from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CCRCCDFSTertileII,III,IV0.8380.452.00246view →
HNSCDFSTertileII,III,IV0.9110.663.00545view →
UCECDFSTertileIII,IV0.4821.000.04216view →
PDACOSQuartileII,III,IV0.7011.000.0223view →
GBMDFSQuartileAll0.7920.580.0181view →
LUADOSQuartileAll0.7511.000.0491view →
Pink = unfavorable, green = favorable. Showing the 6 strongest of 6 lineages.

RABGAP1–CCRCC (DFS)

Kaplan–Meier survival curve for RABGAP1 mass-spec protein-high vs -low samples in CCRCC.

Open the CCRCC breakdown →

Exploration