RAB9A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB9A protein abundance is significantly associated with the RNA expression of many other genes, with 12,983 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible RAB9A-associated genes across cancer lineages are MLH3, FRZB, and TMEM30B. Each is linked with RAB9A in more than 4 cancer types. Because this analysis shows association rather than direction, both RAB9A-to-partner and partner-to-RAB9A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB9A versus MLH3 in OV, with a Pearson correlation of -0.35.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB9A→partner) and Y-score (partner→RAB9A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVMLH3 →-0.460-0.345.004.00435
CCRCCFRZB →-1.224-0.271.001<.00134
BRCATMEM30B →-0.619-0.242<.001<.00134
BRCACDK17 →-0.537-0.238<.001<.00134
BRCAZC3H14 →-0.392-0.285.002<.00134
BRCATRIP11 →-0.469-0.219<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,983 associations by consensus.

RAB9A vs MLH3 — OV

Per-sample scatter of RAB9A vs MLH3 in OV (Pearson r = -0.35).

Explore this scatter interactively →

Exploration