RAB44

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB44 protein abundance is significantly associated with the RNA expression of many other genes, with 9,951 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAB44-associated genes across cancer lineages are CSF3R, HCAR3, and MEFV. Each is linked with RAB44 in more than 6 cancer types. Because this analysis shows association rather than direction, both RAB44-to-partner and partner-to-RAB44 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB44 versus CSF3R in GBM, with a Pearson correlation of 0.71.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB44→partner) and Y-score (partner→RAB44) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCSF3R →+1.825+1.750<.001<.00137
OVHCAR3 →+2.035+2.012.009.00237
LSCCMEFV →+0.848+0.616<.001<.00136
COADPROK2 →+1.039+0.889.005<.00136
GBMCLEC4E →+1.250+0.875<.001.00236
OVCXCL8 →+3.218+1.534.002.00236
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,951 associations by consensus.

RAB44 vs CSF3R — GBM

Per-sample scatter of RAB44 vs CSF3R in GBM (Pearson r = 0.71).

Explore this scatter interactively →

Exploration