RAB3C

Across TCGA patient cohorts, RAB3C protein abundance is significantly associated with the RNA expression of many other genes, with 6,873 significant associations in total. GBM shows the largest number of these associations.

The most reproducible RAB3C-associated genes across cancer lineages are CA10, RTN4RL1, and GDAP1L1. Each is linked with RAB3C in more than 3 cancer types. Because this analysis shows association rather than direction, both RAB3C-to-partner and partner-to-RAB3C results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB3C versus CA10 in GBM, with a Pearson correlation of 0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB3C→partner) and Y-score (partner→RAB3C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CA10 →	+1.949	+0.586	<.001	<.001	3	3
UCEC	RTN4RL1 →	+1.605	+0.806	.001	.004	3	3
GBM	GDAP1L1 →	+1.204	+0.653	<.001	<.001	3	3
HNSC	NCAM1 →	+1.126	+0.602	.007	.003	3	3
GBM	DYNC1I1 →	+1.266	+0.712	<.001	<.001	3	3
GBM	FAM107A →	+1.198	+0.568	<.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,873 associations by consensus.

RAB3C vs CA10 — GBM

Explore this scatter interactively →