RAB39A

Across TCGA patient cohorts, RAB39A protein abundance is significantly associated with the RNA expression of many other genes, with 5,109 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAB39A-associated genes across cancer lineages are IFI30, NCF4, and MYO1G. Each is linked with RAB39A in more than 3 cancer types. Because this analysis shows association rather than direction, both RAB39A-to-partner and partner-to-RAB39A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB39A versus IFI30 in CCRCC, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB39A→partner) and Y-score (partner→RAB39A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
CCRCC	IFI30 →	+0.864	+0.644	.005	.003	3	4
OV	NCF4 →	+0.865	+0.469	.002	.002	3	3
OV	MYO1G →	+0.887	+0.528	.002	<.001	3	3
OV	LAIR1 →	+1.141	+0.487	.001	<.001	3	3
OV	TRGV5P →	+1.460	+0.505	.001	<.001	3	3
OV	TNFRSF1B →	+1.258	+0.550	.001	.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,109 associations by consensus.

RAB39A vs IFI30 — CCRCC

Explore this scatter interactively →