RAB39A

Across TCGA cell cohorts, RAB39A mutation is significantly associated with the RNA expression of many other genes, with 2 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible RAB39A-associated genes across cancer lineages are IQCF6 and CD300H. Each is linked with RAB39A in more than 1 cancer types. Because this analysis shows association rather than direction, both RAB39A-to-partner and partner-to-RAB39A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, IQCF6 grouped by RAB39A-low versus RAB39A-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB39A→partner) and Y-score (partner→RAB39A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	IQCF6 →	+0.311	+4.467	<.001	.004	3	1
LARGE_INTESTINE	CD300H →	+0.033	+4.415	<.001	.007	3	1

Each partner links to its Q-omics profile. Showing the 2 strongest of 2 associations by consensus.

IQCF6 by RAB39A expression — LARGE_INTESTINE

Explore this box plot interactively →