RAB30-DT

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RAB30-DT RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of RAB30-DT’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where RAB30-DT RNA is repressed in tumor relative to normal tissue. In most cancer types RAB30-DT is over-expressed in tumor, although a few such as KICH and THCA show the opposite, repressed pattern.

KICH, THCA, and LIHC are the cancer types where RAB30-DT tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in RAB30-DT RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHMaleIII,IV−1.140<.00110view →
THCAMaleAll−0.646<.00110view →
LIHCMaleAll+1.048<.0019view →
HNSCMaleAll+0.597<.0018view →
LUSCAllAll+0.474<.0016view →
CHOLFemaleAll+1.253<.0015view →
STADAllII,III,IV+0.606.0024view →
LUADAllAll+0.453<.0014view →
KIRPAllAll−0.392.0062view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

RAB30-DT–KICH

Tumor-vs-normal expression box plot for RAB30-DT RNA in KICH.

Open the KICH breakdown →

Exploration