RAB1B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB1B protein abundance is significantly associated with the RNA expression of many other genes, with 9,917 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAB1B-associated genes across cancer lineages are ARL10, MAFG-DT, and BLMH. Each is linked with RAB1B in more than 4 cancer types. Because this analysis shows association rather than direction, both RAB1B-to-partner and partner-to-RAB1B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB1B versus ARL10 in LSCC, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB1B→partner) and Y-score (partner→RAB1B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCARL10 →-0.620-0.199<.001.00235
LSCCMAFG-DT →-0.606-0.191<.001<.00135
LSCCBLMH →-0.739-0.241<.001<.00135
CCRCCC11orf54 →+0.605+0.106<.001<.00134
BRCAADA →-0.709-0.381<.001.00225
CCRCCTSPAN1 →+1.595+0.103<.001.00934
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,917 associations by consensus.

RAB1B vs ARL10 — LSCC

Per-sample scatter of RAB1B vs ARL10 in LSCC (Pearson r = -0.37).

Explore this scatter interactively →

Exploration