RAB1A

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB1A protein abundance is significantly associated with the RNA expression of many other genes, with 11,552 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible RAB1A-associated genes across cancer lineages are CILP, MEF2C, and GAS1. Each is linked with RAB1A in more than 4 cancer types. Because this analysis shows association rather than direction, both RAB1A-to-partner and partner-to-RAB1A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB1A versus CILP in LUAD, with a Pearson correlation of -0.37.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB1A→partner) and Y-score (partner→RAB1A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADCILP →-1.882-0.231<.001<.00135
HNSCMEF2C →-0.742-0.165.005.00135
GBMGAS1 →-1.404-0.154.001.00235
UCECPHF19 →-0.628-0.413<.001<.00135
CCRCCRGS4 →-0.881-0.258.001<.00134
HNSCFBXW2 →-0.315-0.173.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,552 associations by consensus.

RAB1A vs CILP — LUAD

Per-sample scatter of RAB1A vs CILP in LUAD (Pearson r = -0.37).

Explore this scatter interactively →

Exploration