RAB11FIP4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB11FIP4 protein abundance is significantly associated with the RNA expression of many other genes, with 5,240 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAB11FIP4-associated genes across cancer lineages are TUBB, RNF8, and HGD. Each is linked with RAB11FIP4 in more than 2 cancer types. Because this analysis shows association rather than direction, both RAB11FIP4-to-partner and partner-to-RAB11FIP4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB11FIP4 versus TUBB in OV, with a Pearson correlation of -0.45.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB11FIP4→partner) and Y-score (partner→RAB11FIP4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTUBB →-0.626-0.761.004.00633
OVRNF8 →-0.561-0.754.008.00632
OVHGD →+1.883+0.910<.001<.00132
LSCCDNASE2B →+0.347+0.278.001.00532
OVPTPN9 →-0.780-0.860.001.00832
OVSMIM29 →-0.780-1.036<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,240 associations by consensus.

RAB11FIP4 vs TUBB — OV

Per-sample scatter of RAB11FIP4 vs TUBB in OV (Pearson r = -0.45).

Explore this scatter interactively →

Exploration