RAB11FIP3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RAB11FIP3 RNA expression is significantly associated with the protein abundance of many other proteins, with 15,613 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible RAB11FIP3-associated proteins across cancer lineages are RPL5, MYEF2, and VASP. Each is linked with RAB11FIP3 in more than 4 cancer types. Because this analysis shows association rather than direction, both RAB11FIP3-to-partner and partner-to-RAB11FIP3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, RAB11FIP3 versus RPL5 in BRCA, with a Pearson correlation of -0.45.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (RAB11FIP3→partner) and Y-score (partner→RAB11FIP3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCARPL5 →-0.221-0.816<.001<.00135
HNSCMYEF2 →+0.622+0.477.002.00135
GBMVASP →-0.394-0.308<.001<.00135
GBMMLKL →-0.467-0.440.002<.00135
BRCAACTR2 →-0.141-0.532.001.00235
GBMEHBP1L1 →-0.382-0.372<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 15,613 associations by consensus.

RAB11FIP3 vs RPL5 — BRCA

Per-sample scatter of RAB11FIP3 vs RPL5 in BRCA (Pearson r = -0.45).

Explore this scatter interactively →

Exploration