R3HCC1L

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, R3HCC1L mutation is significantly associated with the RNA expression of many other genes, with 12 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible R3HCC1L-associated genes across cancer lineages are KLK12, IFNA14, and SPDYE4. Each is linked with R3HCC1L in more than 1 cancer types. Because this analysis shows association rather than direction, both R3HCC1L-to-partner and partner-to-R3HCC1L results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KLK12 grouped by R3HCC1L-low versus R3HCC1L-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (R3HCC1L→partner) and Y-score (partner→R3HCC1L) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEKLK12 →+1.031+4.930<.001.00831
SOFT_TISSUEIFNA14 →+0.028+5.369<.001.00431
SKINSPDYE4 →+0.022+3.930<.001.00331
SKINSLC15A5 →+0.039+4.562<.001<.00131
OVARYOR2T4 →+0.025+4.807<.001.00331
OVARYOR2L8 →+0.041+4.450<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 12 associations by consensus.

KLK12 by R3HCC1L expression — SOFT_TISSUE

Box plot of KLK12 in R3HCC1L-low vs R3HCC1L-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration