QDPR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, QDPR protein abundance is significantly associated with the RNA expression of many other genes, with 14,742 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible QDPR-associated genes across cancer lineages are ABCA8, N4BP2L1, and RAI2. Each is linked with QDPR in more than 6 cancer types. Because this analysis shows association rather than direction, both QDPR-to-partner and partner-to-QDPR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, QDPR versus ABCA8 in UCEC, with a Pearson correlation of 0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (QDPR→partner) and Y-score (partner→QDPR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECABCA8 →+1.224+0.307<.001<.00137
HNSCN4BP2L1 →+0.905+0.395<.001<.00137
BRCARAI2 →+1.096+0.449<.001<.00136
CCRCCASPA →+1.291+0.251<.001<.00136
LSCCPEBP4 →+2.018+0.316<.001<.00136
GBMCCNF →-0.581-0.382.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,742 associations by consensus.

QDPR vs ABCA8 — UCEC

Per-sample scatter of QDPR vs ABCA8 in UCEC (Pearson r = 0.40).

Explore this scatter interactively →

Exploration