Across TCGA patient cohorts, PTPRT-AS1 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,334 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PTPRT-AS1-associated GO terms across cancer lineages are Morphogenesis of a polarized epithelium, Obsolete ncRNA transcription, and Microtubule-based transport. Each is linked with PTPRT-AS1 in more than 8 cancer types. Because this analysis shows association rather than direction, both PTPRT-AS1-to-partner and partner-to-PTPRT-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PTPRT-AS1→partner) and Y-score (partner→PTPRT-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Morphogenesis of a polarized epithelium →	+0.063	+0.095	<.001	<.001	3	9
STAD	Obsolete ncRNA transcription →	+0.089	+0.109	<.001	<.001	3	8
STAD	Microtubule-based transport →	+0.063	+0.104	<.001	<.001	3	8
STAD	Negative regulation of fibroblast proliferation →	+0.068	+0.105	<.001	<.001	3	8
STAD	Stem cell differentiation →	+0.072	+0.108	<.001	<.001	3	8
STAD	Respiratory chain complex IV assembly →	+0.089	+0.107	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,334 associations by consensus.

Exploration

PTPRT-AS1 survival (RNA) · tumor vs normal (RNA) · all PTPRT-AS1 data types