PTPRN2-AS1

Across TCGA patient cohorts, PTPRN2-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,240 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PTPRN2-AS1-associated proteins across cancer lineages are CD14, IFI30, and DEF6. Each is linked with PTPRN2-AS1 in more than 8 cancer types. Because this analysis shows association rather than direction, both PTPRN2-AS1-to-partner and partner-to-PTPRN2-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PTPRN2-AS1 versus CD14 in GBM, with a Pearson correlation of 0.28.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PTPRN2-AS1→partner) and Y-score (partner→PTPRN2-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CD14 →	+0.610	+0.465	.002	.008	3	9
GBM	IFI30 →	+0.978	+0.620	<.001	.001	3	9
UCEC	DEF6 →	+0.413	+0.568	.001	<.001	3	8
HNSC	EVL →	+0.765	+0.601	<.001	<.001	3	8
UCEC	GPSM3 →	+0.563	+0.692	<.001	<.001	3	8
OV	HCLS1 →	+0.725	+0.511	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,240 associations by consensus.

PTPRN2-AS1 vs CD14 — GBM

Explore this scatter interactively →