PTPRD-AS2

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTPRD-AS2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,615 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PTPRD-AS2-associated GO terms across cancer lineages are Microtubule polymerization or depolymerization, Regulation of microtubule-based process, and Establishment of protein localization to membrane. Each is linked with PTPRD-AS2 in more than 8 cancer types. Because this analysis shows association rather than direction, both PTPRD-AS2-to-partner and partner-to-PTPRD-AS2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PTPRD-AS2→partner) and Y-score (partner→PTPRD-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STADMicrotubule polymerization or depolymerization →+0.065+0.027<.001<.00139
STADRegulation of microtubule-based process →+0.057+0.028<.001<.00139
STADEstablishment of protein localization to membrane →+0.073+0.054<.001<.00139
STADProtein polymerization →+0.064+0.026<.001<.00139
STADProtein stabilization →+0.072+0.053<.001<.00138
STADNegative regulation of cell projection organization →+0.044+0.050<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,615 associations by consensus.

Exploration