PTHLH

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTHLH protein abundance is significantly associated with the RNA expression of many other genes, with 8,980 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PTHLH-associated genes across cancer lineages are RNF125, GGA2, and CCP110. Each is linked with PTHLH in more than 1 cancer types. Because this analysis shows association rather than direction, both PTHLH-to-partner and partner-to-PTHLH results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PTHLH versus RNF125 in HNSC, with a Pearson correlation of -0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTHLH→partner) and Y-score (partner→PTHLH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCRNF125 →-0.731-1.166<.001.00232
HNSCGGA2 →-0.739-1.468.005.00132
HNSCCCP110 →-0.555-1.232.003.00332
HNSCNDRG1 →+1.504+1.381<.001<.00132
HNSCMAP4K1 →-0.883-1.620.006<.00132
HNSCCD37 →-1.052-2.287<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,980 associations by consensus.

PTHLH vs RNF125 — HNSC

Per-sample scatter of PTHLH vs RNF125 in HNSC (Pearson r = -0.49).

Explore this scatter interactively →

Exploration