PTGFR

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTGFR protein abundance is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PTGFR-associated genes across cancer lineages are POU4F1, RNU6-1051P, and OR7E36P. Each is linked with PTGFR in more than 1 cancer types. Because this analysis shows association rather than direction, both PTGFR-to-partner and partner-to-PTGFR results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PTGFR versus POU4F1 in BRCA, with a Pearson correlation of 0.98.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTGFR→partner) and Y-score (partner→PTGFR) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAPOU4F1 →+0.860+1.456.009.00431
BRCARNU6-1051P →+1.016+1.374<.001.00231
BRCAOR7E36P →+0.183+1.374<.001.00231
BRCAIGHD5-18 →+2.906+1.374<.001.00231
BRCARNU2-52P →+0.636+1.374.001.00231
BRCAHMGB1P27 →+0.433+1.456.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

PTGFR vs POU4F1 — BRCA

Per-sample scatter of PTGFR vs POU4F1 in BRCA (Pearson r = 0.98).

Explore this scatter interactively →

Exploration