PTGES

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PTGES mutation is significantly associated with the RNA expression of many other genes, with 43 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PTGES-associated genes across cancer lineages are RNA5SP414, MIR7702, and RNA5SP411. Each is linked with PTGES in more than 1 cancer types. Because this analysis shows association rather than direction, both PTGES-to-partner and partner-to-PTGES results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP414 grouped by PTGES-low versus PTGES-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PTGES→partner) and Y-score (partner→PTGES) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP414 →+1.807+4.577<.001<.00131
UCECMIR7702 →+0.537+5.738<.001<.00131
UCECRNA5SP411 →+3.161+4.978<.001<.00131
UCECRNA5SP412 →+1.652+4.289<.001<.00131
UCECMIR6854 →+0.316+4.260<.001.00731
UCECRNA5SP124 →+0.628+2.996<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 43 associations by consensus.

RNA5SP414 by PTGES expression — UCEC

Box plot of RNA5SP414 in PTGES-low vs PTGES-high samples in UCEC.

Explore this box plot interactively →

Exploration