PSMD13

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PSMD13 protein abundance is significantly associated with the RNA expression of many other genes, with 12,458 significant associations in total. CCRCC shows the largest number of these associations.

The most reproducible PSMD13-associated genes across cancer lineages are LRRC59, RRM2, and KPNA2. Each is linked with PSMD13 in more than 5 cancer types. Because this analysis shows association rather than direction, both PSMD13-to-partner and partner-to-PSMD13 results are reported.

Each partner links to its own Q-omics profile.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSMD13→partner) and Y-score (partner→PSMD13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADLRRC59 →+0.499+0.183<.001<.00136
GBMRRM2 →+0.967+0.135<.001<.00136
LSCCKPNA2 →+0.767+0.140<.001<.00136
COADTUBG1 →+0.565+0.136.002.00236
LUADTRIP13 →+1.019+0.124<.001<.00136
HNSCCBX7 →-0.705-0.209<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,458 associations by consensus.

Exploration