PSMA3-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, PSMA3-AS1 RNA differs between tumor and matched normal tissue in 10 of 18 cancer types tested, making tumor–normal expression one of PSMA3-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in liver hepatocellular carcinoma (LIHC), where PSMA3-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types PSMA3-AS1 is over-expressed in tumor, although a few such as KIRC and LUSC show the opposite, repressed pattern.

LIHC, KIRC, and LUSC are the cancer types where PSMA3-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in PSMA3-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LIHCFemaleII,III,IV+0.881<.0018view →
KIRCAllII,III,IV−0.311.0018view →
LUSCAllAll−0.475<.0017view →
KICHFemaleAll−0.876<.0016view →
LUADAllII,III,IV−0.555.0026view →
BRCAFemaleAll−0.308<.0014view →
CHOLMaleAll+1.576<.0013view →
STADAllII,III,IV+0.456.0262view →
UCECAllAll−0.335.0252view →
THCAAllAll−0.256.0132view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 10 strongest of 10 lineages.

PSMA3-AS1–LIHC

Tumor-vs-normal expression box plot for PSMA3-AS1 RNA in LIHC.

Open the LIHC breakdown →

Exploration