PSG8

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PSG8 mutation is significantly associated with the RNA expression of many other genes, with 18 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible PSG8-associated genes across cancer lineages are SPANXN4, GALNTL5, and TSPAN16. Each is linked with PSG8 in more than 1 cancer types. Because this analysis shows association rather than direction, both PSG8-to-partner and partner-to-PSG8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SPANXN4 grouped by PSG8-low versus PSG8-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PSG8→partner) and Y-score (partner→PSG8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaSPANXN4 →+0.107+4.867<.001.00931
LUNG_NSCLC_LUADGALNTL5 →+0.052+3.544<.001.00931
LUNG_NSCLC_LUADTSPAN16 →+0.066+4.157<.001.00331
LUNG_NSCLC_LUADTAAR8 →+0.013+4.078<.001.00931
LUNG_NSCLC_LUADOTOP1 →+0.013+4.215<.001.00231
LUNG_NSCLC_LUADOR10G7 →+0.009+4.078<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

SPANXN4 by PSG8 expression — BLOOD_Lymphoma

Box plot of SPANXN4 in PSG8-low vs PSG8-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration