PSG6

Across TCGA patient cohorts, PSG6 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,135 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PSG6-associated proteins across cancer lineages are RFC4, SF3B6, and VRK1. Each is linked with PSG6 in more than 3 cancer types. Because this analysis shows association rather than direction, both PSG6-to-partner and partner-to-PSG6 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PSG6 versus RFC4 in GBM, with a Pearson correlation of -0.35.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PSG6→partner) and Y-score (partner→PSG6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RFC4 →	-0.471	-0.296	<.001	.002	3	3
GBM	SF3B6 →	-0.337	-0.448	<.001	<.001	3	3
GBM	VRK1 →	-0.457	-0.278	.001	.002	3	3
HNSC	SCRN1 →	+0.278	+0.648	.001	.004	2	4
GBM	BASP1 →	+0.787	+0.309	<.001	<.001	3	3
GBM	ACTR1A →	+0.419	+0.413	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,135 associations by consensus.

PSG6 vs RFC4 — GBM

Explore this scatter interactively →