PRSS58

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PRSS58 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible PRSS58-associated genes across cancer lineages are DEFB129, CIB3, and PPP3R2. Each is linked with PRSS58 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRSS58-to-partner and partner-to-PRSS58 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, DEFB129 grouped by PRSS58-low versus PRSS58-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRSS58→partner) and Y-score (partner→PRSS58) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINDEFB129 →+0.021+4.022<.001.00631
SKINCIB3 →+0.097+4.115.004.00131
SKINPPP3R2 →+0.015+3.459<.001.00921
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

DEFB129 by PRSS58 expression — SKIN

Box plot of DEFB129 in PRSS58-low vs PRSS58-high samples in SKIN.

Explore this box plot interactively →

Exploration