PRSS22

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRSS22 mutation is significantly associated with the RNA expression of many other genes, with 63 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRSS22-associated genes across cancer lineages are RN7SL750P, HHLA3-AS1, and LINC02536. Each is linked with PRSS22 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRSS22-to-partner and partner-to-PRSS22 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL750P grouped by PRSS22-low versus PRSS22-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRSS22→partner) and Y-score (partner→PRSS22) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL750P →+0.249+3.113.001.00132
UCECHHLA3-AS1 →+0.298+3.530.004.00732
HNSCLINC02536 →+0.066+5.368.003.00531
UCECIL21 →+0.233+3.834<.001<.00131
UCECMIR4539 →+1.204+3.273<.001.00131
STADMIR6803 →+0.609+5.798<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 63 associations by consensus.

RN7SL750P by PRSS22 expression — UCEC

Box plot of RN7SL750P in PRSS22-low vs PRSS22-high samples in UCEC.

Explore this box plot interactively →

Exploration