PRRC1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRRC1 mutation is significantly associated with the RNA expression of many other genes, with 2,920 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRRC1-associated genes across cancer lineages are RNU6-1305P, MIR8082, and SEPTIN14P19. Each is linked with PRRC1 in more than 2 cancer types. Because this analysis shows association rather than direction, both PRRC1-to-partner and partner-to-PRRC1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1305P grouped by PRRC1-low versus PRRC1-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRRC1→partner) and Y-score (partner→PRRC1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRNU6-1305P →+0.300+4.224<.001.00233
UCECMIR8082 →+0.324+1.898<.001.00932
BLCASEPTIN14P19 →+0.053+4.685<.001.00732
COADRN7SL98P →+0.208+5.278.001<.00132
UCECZNF114-AS1 →+0.370+1.877<.001.00132
SKCMCYP4F27P →+0.209+3.408.003.00932
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,920 associations by consensus.

RNU6-1305P by PRRC1 expression — SKCM

Box plot of RNU6-1305P in PRRC1-low vs PRRC1-high samples in SKCM.

Explore this box plot interactively →

Exploration