PROSER1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PROSER1 mutation is significantly associated with the RNA expression of many other genes, with 5,386 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PROSER1-associated genes across cancer lineages are CCDC82, MTA2, and CPSF7. Each is linked with PROSER1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PROSER1-to-partner and partner-to-PROSER1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CCDC82 grouped by PROSER1-low versus PROSER1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PROSER1→partner) and Y-score (partner→PROSER1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCCDC82 →+0.336+3.711.008<.00132
UCECMTA2 →+0.458+2.435<.001<.00132
UCECCPSF7 →+0.400+1.939<.001<.00132
UCECSCLT1 →+0.361+1.730<.001<.00132
UCECSUV39H2 →+0.535+2.408<.001<.00132
UCECDCLRE1C →+0.270+3.042.008<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,386 associations by consensus.

CCDC82 by PROSER1 expression — UCEC

Box plot of CCDC82 in PROSER1-low vs PROSER1-high samples in UCEC.

Explore this box plot interactively →

Exploration