PRODH

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRODH RNA expression is significantly associated with the protein abundance of many other proteins, with 12,994 significant associations in total. GBM shows the largest number of these associations.

The most reproducible PRODH-associated proteins across cancer lineages are PPP1R18, KIF21A_S1212, and MANF. Each is linked with PRODH in more than 3 cancer types. Because this analysis shows association rather than direction, both PRODH-to-partner and partner-to-PRODH results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRODH versus PPP1R18 in LSCC, with a Pearson correlation of -0.29.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PRODH→partner) and Y-score (partner→PRODH) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCPPP1R18 →-0.330-0.918<.001.00134
LSCCKIF21A_S1212 →+0.698+0.706<.001.00434
LSCCMANF →-0.509-0.960<.001.00134
LUADSPATS2 →-0.243-1.205.003<.00134
LUADSPCS3 →-0.492-1.155.001.00234
CCRCCCEBPB →-0.455-0.881<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,994 associations by consensus.

PRODH vs PPP1R18 — LSCC

Per-sample scatter of PRODH vs PPP1R18 in LSCC (Pearson r = -0.29).

Explore this scatter interactively →

Exploration