PRKD1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRKD1 mutation is significantly associated with the total protein of many other genes, with 67 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRKD1-associated genes across cancer lineages are PKC-a_pS657, S6_pS240_S244, and BRCA2. Each is linked with PRKD1 in more than 2 cancer types. Because this analysis shows association rather than direction, both PRKD1-to-partner and partner-to-PRKD1 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRKD1→partner) and Y-score (partner→PRKD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPKC-a_pS657 →-0.306-2.982.007.03433
UCECS6_pS240_S244 →+0.460+2.263<.001<.00133
UCECBRCA2 →-0.123-3.278.004.00933
UCECCaspase-7-cleavedD198 →+0.721+2.522<.001<.00133
STADeEF2 →+0.499+3.000.001.03632
STADbeta-Catenin →+0.887+3.000.018.03632
Each partner links to its Q-omics profile. Showing the 6 strongest of 67 associations by consensus.

Exploration