PRKCQ

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PRKCQ mutation is significantly associated with the RNA expression of many other genes, with 37 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible PRKCQ-associated genes across cancer lineages are GPR119, MRGPRE, and OTUD6A. Each is linked with PRKCQ in more than 1 cancer types. Because this analysis shows association rather than direction, both PRKCQ-to-partner and partner-to-PRKCQ results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GPR119 grouped by PRKCQ-low versus PRKCQ-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRKCQ→partner) and Y-score (partner→PRKCQ) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaGPR119 →+0.025+4.867<.001.00932
BLOOD_LymphomaMRGPRE →+0.019+5.209<.001.00532
BLOOD_LymphomaOTUD6A →+0.113+5.209<.001.00532
BLOOD_LymphomaTEX13A →+0.036+5.643<.001.00232
SOFT_TISSUECLPS →+0.092+4.392<.001.00431
BREASTCFC1B →+0.005+4.781<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 37 associations by consensus.

GPR119 by PRKCQ expression — BLOOD_Lymphoma

Box plot of GPR119 in PRKCQ-low vs PRKCQ-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration