PRKAR2A

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRKAR2A mutation is significantly associated with the immune_cell of many other genes, with 4 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRKAR2A-associated genes across cancer lineages are Preadipocytes, aDC, and Macrophages M2. Each is linked with PRKAR2A in more than 1 cancer types. Because this analysis shows association rather than direction, both PRKAR2A-to-partner and partner-to-PRKAR2A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Preadipocytes grouped by PRKAR2A-low versus PRKAR2A-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRKAR2A→partner) and Y-score (partner→PRKAR2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADPreadipocytes →+0.073+4.169<.001.02731
UCECaDC →+0.080+2.180.038.03631
UCECMacrophages M2 →+0.011+2.287.042.03031
UCECpDC →+0.058+2.180.023.03621
Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

Preadipocytes by PRKAR2A expression — COAD

Box plot of Preadipocytes in PRKAR2A-low vs PRKAR2A-high samples in COAD.

Explore this box plot interactively →

Exploration