PRDX4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRDX4 protein abundance is significantly associated with the RNA expression of many other genes, with 22,166 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PRDX4-associated genes across cancer lineages are BHLHA15, IGKC, and IGLV6-57. Each is linked with PRDX4 in more than 5 cancer types. Because this analysis shows association rather than direction, both PRDX4-to-partner and partner-to-PRDX4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRDX4 versus BHLHA15 in LUAD, with a Pearson correlation of 0.39.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRDX4→partner) and Y-score (partner→PRDX4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADBHLHA15 →+0.943+0.377<.001<.00136
HNSCIGKC →+3.156+0.568<.001<.00136
BRCAIGLV6-57 →+2.774+0.493<.001<.00136
HNSCIGLV3-21 →+2.565+0.508.001<.00136
HNSCIGHV3-30 →+2.399+0.448.001<.00136
HNSCAQR →-0.578-0.390<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 22,166 associations by consensus.

PRDX4 vs BHLHA15 — LUAD

Per-sample scatter of PRDX4 vs BHLHA15 in LUAD (Pearson r = 0.39).

Explore this scatter interactively →

Exploration