PRDX3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRDX3 protein abundance is significantly associated with the RNA expression of many other genes, with 13,118 significant associations in total. OV shows the largest number of these associations.

The most reproducible PRDX3-associated genes across cancer lineages are SFXN4, TREM1, and FPR2. Each is linked with PRDX3 in more than 5 cancer types. Because this analysis shows association rather than direction, both PRDX3-to-partner and partner-to-PRDX3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PRDX3 versus SFXN4 in LUAD, with a Pearson correlation of 0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRDX3→partner) and Y-score (partner→PRDX3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADSFXN4 →+0.509+0.278<.001<.00136
COADTREM1 →-1.273-0.343<.001<.00135
COADFPR2 →-1.168-0.334.001<.00135
COADSRSF3 →-0.517-0.413<.001<.00134
LUADZNF430 →-0.466-0.307<.001.00134
LUADECHS1 →+0.410+0.307.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,118 associations by consensus.

PRDX3 vs SFXN4 — LUAD

Per-sample scatter of PRDX3 vs SFXN4 in LUAD (Pearson r = 0.52).

Explore this scatter interactively →

Exploration