PRAMEF8

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PRAMEF8 mutation is significantly associated with the total protein of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PRAMEF8-associated genes across cancer lineages are Ku80, CD20, and TIGAR. Each is linked with PRAMEF8 in more than 1 cancer types. Because this analysis shows association rather than direction, both PRAMEF8-to-partner and partner-to-PRAMEF8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ku80 grouped by PRAMEF8-low versus PRAMEF8-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PRAMEF8→partner) and Y-score (partner→PRAMEF8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECKu80 →+0.424+2.820.003.03631
UCECCD20 →+0.190+2.827.018.03531
UCECTIGAR →+0.203+2.833.029.03521
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

Ku80 by PRAMEF8 expression — UCEC

Box plot of Ku80 in PRAMEF8-low vs PRAMEF8-high samples in UCEC.

Explore this box plot interactively →

Exploration