PRAMEF31P

Across TCGA patient cohorts, PRAMEF31P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,530 significant associations in total. STAD shows the largest number of these associations.

The most reproducible PRAMEF31P-associated GO terms across cancer lineages are Negative regulation of double-strand break repair via homologous recombination, Carbohydrate biosynthetic process, and Negative regulation of protein binding. Each is linked with PRAMEF31P in more than 7 cancer types. Because this analysis shows association rather than direction, both PRAMEF31P-to-partner and partner-to-PRAMEF31P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of double-strand break repair via homologous recombination grouped by PRAMEF31P-low versus PRAMEF31P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (PRAMEF31P→partner) and Y-score (partner→PRAMEF31P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Negative regulation of double-strand break repair via homologous recombination →	+0.076	+0.161	<.001	<.001	3	8
STAD	Carbohydrate biosynthetic process →	+0.064	+0.184	<.001	<.001	3	8
STAD	Negative regulation of protein binding →	+0.085	+0.164	<.001	<.001	3	8
STAD	Biological process involved in interaction with symbiont →	+0.075	+0.157	<.001	<.001	3	8
STAD	Regulation of carbohydrate metabolic process →	+0.068	+0.165	<.001	<.001	3	8
STAD	rRNA base methylation →	+0.059	+0.165	<.001	<.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,530 associations by consensus.

Negative regulation of double-strand break repair via homologous recombination by PRAMEF31P expression — STAD

Explore this box plot interactively →