PPP1R9B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPP1R9B mutation is significantly associated with the RNA expression of many other genes, with 603 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PPP1R9B-associated genes across cancer lineages are RPL22P5, CRABP2, and ATP6V0A1. Each is linked with PPP1R9B in more than 1 cancer types. Because this analysis shows association rather than direction, both PPP1R9B-to-partner and partner-to-PPP1R9B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL22P5 grouped by PPP1R9B-low versus PPP1R9B-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPP1R9B→partner) and Y-score (partner→PPP1R9B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRPL22P5 →+0.047+3.362.007.00632
UCECCRABP2 →-1.253-2.700.006.00632
UCECATP6V0A1 →+0.389+2.246.003.00532
UCECACOT7 →+0.612+2.238.005.00632
CESCRN7SL627P →+0.150+5.891<.001<.00132
UCECSNORA10B →+0.244+2.709<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 603 associations by consensus.

RPL22P5 by PPP1R9B expression — SKCM

Box plot of RPL22P5 in PPP1R9B-low vs PPP1R9B-high samples in SKCM.

Explore this box plot interactively →

Exploration