PPP1R9A

Across TCGA patient cohorts, PPP1R9A protein abundance is significantly associated with the RNA expression of many other genes, with 12,218 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PPP1R9A-associated genes across cancer lineages are PPP1R9A-AS1, HINT1P2, and CASD1. Each is linked with PPP1R9A in more than 6 cancer types. Because this analysis shows association rather than direction, both PPP1R9A-to-partner and partner-to-PPP1R9A results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PPP1R9A versus PPP1R9A-AS1 in HNSC, with a Pearson correlation of 0.69.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPP1R9A→partner) and Y-score (partner→PPP1R9A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	PPP1R9A-AS1 →	+1.235	+1.125	.003	.003	3	7
LSCC	HINT1P2 →	+1.502	+0.776	<.001	<.001	3	7
GBM	CASD1 →	+0.504	+0.323	<.001	<.001	3	5
BRCA	LINC01943 →	-0.630	-0.492	<.001	<.001	3	5
GBM	PON1 →	+0.903	+0.477	<.001	<.001	3	5
OV	CCN4 →	-1.653	-0.590	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,218 associations by consensus.

PPP1R9A vs PPP1R9A-AS1 — HNSC

Explore this scatter interactively →