PPP1R3E

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPP1R3E RNA expression is significantly associated with the protein abundance of many other proteins, with 19,843 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible PPP1R3E-associated proteins across cancer lineages are APEX1, METTL14, and VEZF1. Each is linked with PPP1R3E in more than 5 cancer types. Because this analysis shows association rather than direction, both PPP1R3E-to-partner and partner-to-PPP1R3E results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PPP1R3E versus APEX1 in GBM, with a Pearson correlation of 0.38.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PPP1R3E→partner) and Y-score (partner→PPP1R3E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMAPEX1 →+0.387+0.483<.001.00136
GBMMETTL14 →+0.249+0.509<.001<.00136
GBMVEZF1 →+0.454+0.670<.001<.00136
BRCATCEAL1 →+0.570+0.431<.001<.00135
BRCATCEAL4 →+0.502+0.378<.001<.00135
HNSCTNFRSF12A →-0.807-0.598.002<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 19,843 associations by consensus.

PPP1R3E vs APEX1 — GBM

Per-sample scatter of PPP1R3E vs APEX1 in GBM (Pearson r = 0.38).

Explore this scatter interactively →

Exploration