PPP1R13B

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PPP1R13B mutation is significantly associated with the RNA expression of many other genes, with 909 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PPP1R13B-associated genes across cancer lineages are GHRHR, MYF5, and CDY2A. Each is linked with PPP1R13B in more than 1 cancer types. Because this analysis shows association rather than direction, both PPP1R13B-to-partner and partner-to-PPP1R13B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GHRHR grouped by PPP1R13B-low versus PPP1R13B-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPP1R13B→partner) and Y-score (partner→PPP1R13B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaGHRHR →+0.372+4.420<.001<.00131
BLOOD_LymphomaMYF5 →+0.006+3.662<.001.00931
BLOOD_LymphomaCDY2A →+0.002+3.662<.001.00931
SOFT_TISSUEOR4X2 →+0.032+5.369<.001.00431
SOFT_TISSUEPRR20B →+0.043+5.977<.001.00131
SOFT_TISSUEPRR20A →+0.043+5.977<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 909 associations by consensus.

GHRHR by PPP1R13B expression — BLOOD_Lymphoma

Box plot of GHRHR in PPP1R13B-low vs PPP1R13B-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration