PPM1F

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PPM1F mutation is significantly associated with the total protein of many other genes, with 18 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PPM1F-associated genes across cancer lineages are Shc_pY317, ERK2, and Acetyl-a-Tubulin-Lys40. Each is linked with PPM1F in more than 2 cancer types. Because this analysis shows association rather than direction, both PPM1F-to-partner and partner-to-PPM1F results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Shc_pY317 grouped by PPM1F-low versus PPM1F-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PPM1F→partner) and Y-score (partner→PPM1F) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECShc_pY317 →-0.149-2.000.007.02933
UCECERK2 →+0.186+1.502.008.03032
UCECAcetyl-a-Tubulin-Lys40 →+0.422+1.847.023.00832
UCECAnnexin-1 →+0.421+2.459.029.01832
UCECVHL →-0.851-2.115<.001.01632
UCECDi-Ras3 →-0.132-2.571.015.01032
Each partner links to its Q-omics profile. Showing the 6 strongest of 18 associations by consensus.

Shc_pY317 by PPM1F expression — UCEC

Box plot of Shc_pY317 in PPM1F-low vs PPM1F-high samples in UCEC.

Explore this box plot interactively →

Exploration