POMP

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POMP RNA expression is significantly associated with the protein abundance of many other proteins, with 9,680 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible POMP-associated proteins across cancer lineages are HSPH1, SPRYD7, and NUBPL. Each is linked with POMP in more than 6 cancer types. Because this analysis shows association rather than direction, both POMP-to-partner and partner-to-POMP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, POMP versus HSPH1 in BRCA, with a Pearson correlation of 0.44.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (POMP→partner) and Y-score (partner→POMP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAHSPH1 →+0.525+0.710<.001<.00137
GBMSPRYD7 →+0.247+0.285<.001.00434
BRCANUBPL →-0.545-0.448<.001<.00134
BRCAXPO4 →+0.205+0.375.001.00234
OVCCDC6_S52 →+0.800+0.561<.001<.00134
OVTBC1D15_S70 →-0.874-0.788.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,680 associations by consensus.

POMP vs HSPH1 — BRCA

Per-sample scatter of POMP vs HSPH1 in BRCA (Pearson r = 0.44).

Explore this scatter interactively →

Exploration