POLN

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, POLN mutation is significantly associated with the RNA expression of many other genes, with 2,831 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible POLN-associated genes across cancer lineages are PBK, TPGS2, and AHRR. Each is linked with POLN in more than 2 cancer types. Because this analysis shows association rather than direction, both POLN-to-partner and partner-to-POLN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PBK grouped by POLN-low versus POLN-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (POLN→partner) and Y-score (partner→POLN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPBK →+0.925+2.595<.001<.00133
COADTPGS2 →+0.463+3.223.005.00933
COADAHRR →+0.660+3.199<.001.00933
UCECERH →+0.273+3.743.009<.00133
UCECDAD1 →+0.374+2.354.002.00333
UCECTXNL4A →+0.353+1.917.002.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,831 associations by consensus.

PBK by POLN expression — UCEC

Box plot of PBK in POLN-low vs POLN-high samples in UCEC.

Explore this box plot interactively →

Exploration