PODN

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PODN mutation is significantly associated with the total protein of many other genes, with 45 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PODN-associated genes across cancer lineages are eEF2, GAPDH, and INPP4B. Each is linked with PODN in more than 2 cancer types. Because this analysis shows association rather than direction, both PODN-to-partner and partner-to-PODN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, eEF2 grouped by PODN-low versus PODN-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PODN→partner) and Y-score (partner→PODN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECeEF2 →+0.275+1.502.017.02733
UCECGAPDH →+0.452+1.906.009.01433
COADINPP4B →-0.578-3.313<.001.01032
UCECNF2 →+0.201+1.906.004.01432
UCECPCNA →+0.290+2.736<.001<.00132
UCECSTAT3_pY705 →-0.295-1.999<.001.00832
Each partner links to its Q-omics profile. Showing the 6 strongest of 45 associations by consensus.

eEF2 by PODN expression — UCEC

Box plot of eEF2 in PODN-low vs PODN-high samples in UCEC.

Explore this box plot interactively →

Exploration