PNPLA5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PNPLA5 mutation is significantly associated with the total protein of many other genes, with 19 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible PNPLA5-associated genes across cancer lineages are PKC-delta_pS664, Smad3, and eEF2. Each is linked with PNPLA5 in more than 1 cancer types. Because this analysis shows association rather than direction, both PNPLA5-to-partner and partner-to-PNPLA5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PKC-delta_pS664 grouped by PNPLA5-low versus PNPLA5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PNPLA5→partner) and Y-score (partner→PNPLA5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECPKC-delta_pS664 →-0.108-2.999.039.03532
UCECSmad3 →+0.156+2.321.018.03432
UCECeEF2 →+0.386+3.321.013.01031
UCECEGFR_pY1068 →-0.370-2.807<.001.00331
UCECeIF4E →+0.192+3.013.036.01831
UCECERK2 →+0.226+3.169.007.01831
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

PKC-delta_pS664 by PNPLA5 expression — UCEC

Box plot of PKC-delta_pS664 in PNPLA5-low vs PNPLA5-high samples in UCEC.

Explore this box plot interactively →

Exploration