PNLIPRP2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PNLIPRP2 protein abundance is significantly associated with the RNA expression of many other genes, with 1,113 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible PNLIPRP2-associated genes across cancer lineages are LGALS2, PSMC6, and CNIH1. Each is linked with PNLIPRP2 in more than 1 cancer types. Because this analysis shows association rather than direction, both PNLIPRP2-to-partner and partner-to-PNLIPRP2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PNLIPRP2 versus LGALS2 in PDAC, with a Pearson correlation of 0.32.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PNLIPRP2→partner) and Y-score (partner→PNLIPRP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACLGALS2 →+0.650+0.720.001.00131
PDACPSMC6 →-0.196-0.672.001.00231
PDACCNIH1 →-0.201-0.787.003<.00131
PDACEFS →-0.439-1.006.001.00131
PDACSRP54 →-0.187-0.725<.001.00131
PDACSEC23A →-0.329-1.198.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,113 associations by consensus.

PNLIPRP2 vs LGALS2 — PDAC

Per-sample scatter of PNLIPRP2 vs LGALS2 in PDAC (Pearson r = 0.32).

Explore this scatter interactively →

Exploration