PM20D1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, PM20D1 protein abundance is significantly associated with the RNA expression of many other genes, with 476 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible PM20D1-associated genes across cancer lineages are DIDO1, SLC52A3, and ACOT8. Each is linked with PM20D1 in more than 1 cancer types. Because this analysis shows association rather than direction, both PM20D1-to-partner and partner-to-PM20D1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PM20D1 versus DIDO1 in PDAC, with a Pearson correlation of -0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PM20D1→partner) and Y-score (partner→PM20D1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACDIDO1 →-0.241-0.560.007.00131
PDACSLC52A3 →-0.696-0.546<.001.00531
PDACACOT8 →-0.254-0.478.001.00431
PDACSUV39H1 →-0.275-0.489.003.00531
PDACRBBP7 →-0.288-0.630<.001<.00131
PDACLMF1 →-0.203-0.437.007.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 476 associations by consensus.

PM20D1 vs DIDO1 — PDAC

Per-sample scatter of PM20D1 vs DIDO1 in PDAC (Pearson r = -0.34).

Explore this scatter interactively →

Exploration