PLS3-AS1

Across TCGA patient cohorts, PLS3-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,824 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible PLS3-AS1-associated proteins across cancer lineages are PLS3, CAMSAP2, and CRACR2A. Each is linked with PLS3-AS1 in more than 6 cancer types. Because this analysis shows association rather than direction, both PLS3-AS1-to-partner and partner-to-PLS3-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, PLS3-AS1 versus PLS3 in GBM, with a Pearson correlation of 0.60.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (PLS3-AS1→partner) and Y-score (partner→PLS3-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	PLS3 →	+0.684	+0.642	<.001	<.001	3	7
LSCC	CAMSAP2 →	+0.359	+0.478	<.001	<.001	3	5
BRCA	CRACR2A →	-0.423	-0.421	<.001	<.001	3	4
HNSC	CXorf56 →	+0.244	+0.610	.005	<.001	3	4
HNSC	DHX9 →	+0.253	+0.830	<.001	<.001	3	4
BRCA	DNAJC1 →	-0.505	-0.365	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,824 associations by consensus.

PLS3-AS1 vs PLS3 — GBM

Explore this scatter interactively →