PLEKHG6

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, PLEKHG6 mutation is significantly associated with the RNA expression of many other genes, with 25 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible PLEKHG6-associated genes across cancer lineages are C1orf146, CFHR2, and MAGEB4. Each is linked with PLEKHG6 in more than 1 cancer types. Because this analysis shows association rather than direction, both PLEKHG6-to-partner and partner-to-PLEKHG6 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, C1orf146 grouped by PLEKHG6-low versus PLEKHG6-high in OVARY.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (PLEKHG6→partner) and Y-score (partner→PLEKHG6) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYC1orf146 →+0.038+3.865<.001.00132
BLOOD_LeukemiaCFHR2 →+0.395+5.539<.001.00332
LARGE_INTESTINEMAGEB4 →+0.011+3.415<.001.00132
OVARYASB17 →+0.011+3.807<.001.00931
OVARYASZ1 →+0.072+3.906<.001.00231
OVARYKLHL40 →+0.005+3.865.005.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 25 associations by consensus.

C1orf146 by PLEKHG6 expression — OVARY

Box plot of C1orf146 in PLEKHG6-low vs PLEKHG6-high samples in OVARY.

Explore this box plot interactively →

Exploration